STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01800Sphingomyelin phosphodiesterase. (628 aa)    
Predicted Functional Partners:
Gasu_26600
Tenascin isoform 1.
    
 0.638
Gasu_57030
Glycerophosphoryl diester phosphodiesterase family protein isoform 1.
   
 0.623
Gasu_11570
Transmembrane receptor protein tyrosine kinase.
   
 0.618
Gasu_63770
Transcription factor WRKY19.
    
 0.582
Gasu_13040
Protein tyrosine phosphatase.
    
 0.557
Gasu_06430
Oxysterol-binding protein-like protein.
   
 0.469
Gasu_15800
Chromatin binding protein isoform 2.
    
 0.430
Gasu_29630
E3 ubiquitin ligase SCF complex SKP1 subunit; Belongs to the SKP1 family.
    
 0.408
Gasu_56230
RNA polymerase III transcription factor TFIIIC-like protein.
    
 0.406
Gasu_10110
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.405
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.