STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_60200ExsB (Transcription regulator related protein) isoform 1. (258 aa)    
Predicted Functional Partners:
Gasu_52500
6-pyruvoyl tetrahydrobiopterin synthase.
  
  
 0.993
Gasu_00310
Archaeal ATPase / transposase.
    
  0.901
Gasu_64340
Radical_SAM domain-containing protein.
     
  0.900
Gasu_61150
GTP cyclohydrolase I.
     
 0.634
Gasu_22320
Iron-sulfur cluster-binding protein.
     
 0.619
Gasu_55970
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
     
 0.599
Gasu_50320
Ribosomal protein L28 family protein isoform 1.
     
 0.562
Gasu_27370
50S ribosomal protein L33 (Mitochondrial).
      
 0.560
Gasu_29560
Bifunctional 3,4-dihydroxy 2-butanone 4-phosphate synthase GTP cyclohydrolase II.
      
 0.544
Gasu_02780
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
   
 
 0.534
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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