Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Gasu_10260 | Gasu_11150 | M2X575 | M2Y7C4 | Uncharacterized protein. | RNA polymerase-associated protein RTF1-like protein. | 0.997 |
| Gasu_10260 | Gasu_18600 | M2X575 | M2Y4S5 | Uncharacterized protein. | Transcription elongation factor SPT6. | 0.939 |
| Gasu_10260 | Gasu_26150 | M2X575 | M2Y229 | Uncharacterized protein. | Transcription elongation factor SPT4-like protein. | 0.910 |
| Gasu_10260 | Gasu_35890 | M2X575 | M2XZL6 | Uncharacterized protein. | PAF1 complex protein. | 0.999 |
| Gasu_10260 | Gasu_36550 | M2X575 | M2XFW6 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.792 |
| Gasu_10260 | Gasu_36600 | M2X575 | M2XZ51 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
| Gasu_10260 | Gasu_39630 | M2X575 | M2XF11 | Uncharacterized protein. | Transcription elongation factor SPT5. | 0.949 |
| Gasu_10260 | Gasu_47530 | M2X575 | M2XCT3 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
| Gasu_10260 | Gasu_51340 | M2X575 | M2VVM6 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
| Gasu_10260 | Gasu_57330 | M2X575 | M2WRZ7 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.998 |
| Gasu_11150 | Gasu_10260 | M2Y7C4 | M2X575 | RNA polymerase-associated protein RTF1-like protein. | Uncharacterized protein. | 0.997 |
| Gasu_11150 | Gasu_18600 | M2Y7C4 | M2Y4S5 | RNA polymerase-associated protein RTF1-like protein. | Transcription elongation factor SPT6. | 0.925 |
| Gasu_11150 | Gasu_26150 | M2Y7C4 | M2Y229 | RNA polymerase-associated protein RTF1-like protein. | Transcription elongation factor SPT4-like protein. | 0.934 |
| Gasu_11150 | Gasu_35890 | M2Y7C4 | M2XZL6 | RNA polymerase-associated protein RTF1-like protein. | PAF1 complex protein. | 0.997 |
| Gasu_11150 | Gasu_36550 | M2Y7C4 | M2XFW6 | RNA polymerase-associated protein RTF1-like protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.729 |
| Gasu_11150 | Gasu_36600 | M2Y7C4 | M2XZ51 | RNA polymerase-associated protein RTF1-like protein. | Uncharacterized protein. | 0.999 |
| Gasu_11150 | Gasu_39630 | M2Y7C4 | M2XF11 | RNA polymerase-associated protein RTF1-like protein. | Transcription elongation factor SPT5. | 0.979 |
| Gasu_11150 | Gasu_47530 | M2Y7C4 | M2XCT3 | RNA polymerase-associated protein RTF1-like protein. | Uncharacterized protein. | 0.978 |
| Gasu_11150 | Gasu_51340 | M2Y7C4 | M2VVM6 | RNA polymerase-associated protein RTF1-like protein. | Uncharacterized protein. | 0.997 |
| Gasu_11150 | Gasu_57330 | M2Y7C4 | M2WRZ7 | RNA polymerase-associated protein RTF1-like protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.995 |
page 1 of 6