STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_54820Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (516 aa)    
Predicted Functional Partners:
Gasu_27980
Ornithine aminotransferase.
    
 0.928
Gasu_03150
Spermidine synthase.
  
 0.922
Gasu_60030
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.922
Gasu_36490
N-carbamoylputrescine amidase.
    
 0.913
Gasu_24360
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 
0.903
Gasu_21880
Tyrosine aminotransferase.
  
  
 0.745
Gasu_56640
Tyrosine aminotransferase isoform 1.
  
  
 0.745
Gasu_47920
Tyrosine aminotransferase.
  
  
 0.745
Gasu_04500
Tyrosine aminotransferase.
  
  
 0.745
Gasu_26000
Anthranilate synthase component II.
     
 0.672
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.