STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_51010Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
Gasu_08480
ATP-dependent RNA helicase-like protein.
   
 0.999
Gasu_27950
dUTP pyrophosphatase.
   
 0.967
Gasu_50580
Uncharacterized protein.
    
 0.865
Gasu_60000
Tryptophan/tyrosine permease, HAAAP family.
    
 0.865
Gasu_28610
Uncharacterized protein.
    
 0.803
Gasu_38550
DNA excision repair protein ERCC-4.
   
 0.790
Gasu_19150
Crossover junction endonuclease MUS81 isoform 2.
   
 0.771
Gasu_14720
Bromo domain-containing protein.
    
 0.745
Gasu_41260
Sortilin.
   
 0.744
Gasu_52170
E3 ubiquitin-protein ligase FANCL.
    
 0.744
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.