STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_46100WD repeat-containing protein 61. (323 aa)    
Predicted Functional Partners:
Gasu_36600
Uncharacterized protein.
   
 0.995
Gasu_35890
PAF1 complex protein.
    
 0.855
Gasu_55280
WD_REPEATS_REGION domain-containing protein.
 
 
 
0.849
Gasu_10260
Uncharacterized protein.
    
 0.827
Gasu_51340
Uncharacterized protein.
   
 0.805
Gasu_58040
Ubiquitin.
   
 0.786
Gasu_29490
ATP-dependent RNA helicase.
    
 0.715
Gasu_25900
ATP-dependent RNA helicase.
    
 0.715
Gasu_33140
ATP-dependent RNA helicase.
    
 0.715
Gasu_15950
DNA damage-binding protein 1 isoform 2.
    
 0.697
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.