STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_44070Peroxisomal membrane protein PEX16. (362 aa)    
Predicted Functional Partners:
Gasu_55100
Peroxin 19-1.
    
 0.949
Gasu_00490
Peroxin-3 family protein.
  
 
 0.908
Gasu_45750
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.855
Gasu_14690
Uncharacterized protein.
     
 0.841
Gasu_06960
Mitochondrial fission 1 protein.
     
 0.822
Gasu_49650
Peroxin 14.
    
 0.812
Gasu_49400
AAA-type ATPase; Belongs to the AAA ATPase family.
     
 0.732
Gasu_09830
Peroxisomal biogenesis factor 11.
   
 
 0.714
Gasu_10120
Peroxisomal biogenesis factor 11.
   
 
 0.714
Gasu_14380
AAA-type ATPase.
     
 0.676
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.