STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_42840Anaphase-promoting complex subunit 1. (1642 aa)    
Predicted Functional Partners:
Gasu_43990
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.999
Gasu_42610
Anaphase-promoting complex subunit 8.
   
 0.999
Gasu_55740
Anaphase-promoting complex subunit 3.
    
 0.999
Gasu_47390
Anaphase-promoting complex subunit 1.
    
 0.999
Gasu_42110
Anaphase-promoting complex subunit 6.
   
 0.999
Gasu_03260
Serine/threonine protein kinase.
   
 0.991
Gasu_15430
Mitotic spindle assembly checkpoint protein MAD2 isoform 2.
    
 0.977
Gasu_03470
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.932
Gasu_34770
Cell division cycle 2-like protein 1, cofactor of APC complex.
    
 0.924
Gasu_34890
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.924
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.