STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_41820Cycloeucalenol cycloisomerase. (284 aa)    
Predicted Functional Partners:
Gasu_06490
Cytochrome P45, family 51 (Sterol 14-demethylase); Belongs to the cytochrome P450 family.
     
 0.918
Gasu_60260
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
      
 0.553
Gasu_18960
Delta14-sterol reductase.
      
 0.530
Gasu_28410
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
      
 0.493
Gasu_30210
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
      
 0.491
Gasu_49040
Isopentenyl-diphosphate delta-isomerase.
      
 0.474
Gasu_24370
Putative ergosterol biosynthetic protein 28 isoform 2.
      
 0.456
Gasu_24060
Mevalonate kinase.
      
 0.442
Gasu_11870
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
      
 0.434
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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