STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_41000Homeobox protein cut-like protein isoform 2. (596 aa)    
Predicted Functional Partners:
Gasu_55150
Small nuclear ribonucleoprotein family protein / snRNP family protein.
   
  
 0.599
Gasu_13450
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.594
Gasu_29140
RNA-binding protein.
      
 0.594
Gasu_06950
30S ribosomal protein S5 (Mitochondria); Belongs to the universal ribosomal protein uS5 family.
      
 0.594
Gasu_02030
Diphthine synthase.
      
 0.594
Gasu_63800
Golgi SNAP receptor complex member 1.
    
 0.543
Gasu_57030
Glycerophosphoryl diester phosphodiesterase family protein isoform 1.
    
 
 0.500
Gasu_43650
GRASP55_65 domain-containing protein.
      
 0.471
Gasu_11690
Uncharacterized protein.
      
 0.465
Gasu_30030
Guanylate kinase.
    
 
 0.458
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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