STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_37300tRNA pseudouridine synthase. (329 aa)    
Predicted Functional Partners:
Gasu_17270
50S ribosomal protein L17 (Plastid); Belongs to the bacterial ribosomal protein bL17 family.
 
  
 0.756
Gasu_26000
Anthranilate synthase component II.
     
 0.682
Gasu_33750
Indole-3-glycerol phosphate synthase.
     
 0.682
Gasu_43470
DNA-directed RNA polymerase III subunit C5.
  
  
 0.597
Gasu_40940
DNA-directed RNA polymerase II subunit C.
  
  
 0.597
Gasu_16550
S-adenosyl-methyltransferase.
   
 
 0.584
Gasu_02280
50S ribosomal protein L17 (Mitochondrial); Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.558
Gasu_12180
Transducin family protein / WD-40 repeat family protein isoform 1.
   
 
 0.519
Gasu_11910
28S ribosomal protein S29-related (Mitochondria).
   
 
 0.511
Gasu_04210
tRNA pseudouridine synthase D.
   
 
 0.484
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.