STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_37500Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
Gasu_22500
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 0.766
Gasu_45800
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 0.672
Gasu_29140
RNA-binding protein.
   
 
 0.643
Gasu_29640
G-patch domain-containing protein.
    
 
 0.643
Gasu_56760
Uncharacterized protein.
   
   0.642
Gasu_15810
U3 snoRNP component Utp6p-like protein.
    
 
 0.637
Gasu_60620
Uncharacterized protein.
    
   0.636
Gasu_27780
Uncharacterized protein.
    
   0.636
Gasu_22210
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.636
Gasu_56110
Uncharacterized protein.
    
   0.636
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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