STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_34910Peptidase, M50 family protein. (629 aa)    
Predicted Functional Partners:
Gasu_48060
H3/H4 histone acetyltransferase.
    
 
 0.696
Gasu_48070
H3/H4 histone acetyltransferase.
    
 
 0.696
Gasu_52010
Chromatin remodeling complex / DNA-dep ATPase.
   
 
 0.683
Gasu_38440
Chromatin remodeling complex / DNA-dep ATPase.
   
 
 0.683
Gasu_19670
Uncharacterized protein.
   
 
 0.683
Gasu_30950
Chondroitin-glucuronate 5-epimerase.
   
   0.647
Gasu_43890
TFIIS central domain-containing protein.
   
    0.597
Gasu_44090
DNA repair and recombination protein RAD26.
   
 
 0.527
Gasu_61570
Histone H3.
    
 
 0.496
Gasu_59640
Histone H3; Belongs to the histone H3 family.
    
 
 0.496
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.