STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_31800Aspartate aminotransferase. (410 aa)    
Predicted Functional Partners:
Gasu_36460
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.960
Gasu_36410
Phenylalanine-4-hydroxylase.
  
 
 0.959
Gasu_03270
Alanine transaminase.
   
 0.951
Gasu_15490
Prephenate dehydratase.
    
 0.946
Gasu_04970
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.938
Gasu_55490
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 0.938
Gasu_45330
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.938
Gasu_01630
Prephenate dehydrogenase family protein.
    
 0.938
Gasu_30780
Argininosuccinate synthase.
   
 
 0.936
Gasu_34250
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.934
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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