STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_32410PsbB mRNA maturation factor Mbb1 (Plastid). (569 aa)    
Predicted Functional Partners:
Gasu_36600
Uncharacterized protein.
    
 0.989
Gasu_35890
PAF1 complex protein.
    
 0.649
Gasu_42110
Anaphase-promoting complex subunit 6.
    
 0.647
Gasu_47390
Anaphase-promoting complex subunit 1.
    
 0.645
Gasu_42840
Anaphase-promoting complex subunit 1.
    
 0.643
Gasu_51340
Uncharacterized protein.
   
 0.642
Gasu_43990
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.624
Gasu_47530
Uncharacterized protein.
    
 0.570
Gasu_57330
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.562
Gasu_61570
Histone H3.
   
 0.561
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.