Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_01160 | Gasu_21070 | M2Y9J6 | M2Y3V7 | Serine--glyoxylate transaminase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.917 |
Gasu_01160 | Gasu_21520 | M2Y9J6 | M2Y3D2 | Serine--glyoxylate transaminase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.922 |
Gasu_01160 | Gasu_24950 | M2Y9J6 | M2Y2R8 | Serine--glyoxylate transaminase. | Serine palmitoyltransferase. | 0.822 |
Gasu_01160 | Gasu_25800 | M2Y9J6 | M2W2R7 | Serine--glyoxylate transaminase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.922 |
Gasu_01160 | Gasu_26990 | M2Y9J6 | M2Y1V0 | Serine--glyoxylate transaminase. | Threonine dehydratase. | 0.923 |
Gasu_01160 | Gasu_30970 | M2Y9J6 | M2WZE8 | Serine--glyoxylate transaminase. | Serine palmitoyltransferase. | 0.822 |
Gasu_01160 | Gasu_44560 | M2Y9J6 | M2XX08 | Serine--glyoxylate transaminase. | Glycine/serine hydroxymethyltransferase. | 0.971 |
Gasu_01160 | Gasu_56660 | M2Y9J6 | M2WSD6 | Serine--glyoxylate transaminase. | Tryptophan synthase beta chain. | 0.915 |
Gasu_07380 | Gasu_24950 | M2W815 | M2Y2R8 | 3-dehydrosphinganine reductase. | Serine palmitoyltransferase. | 0.954 |
Gasu_07380 | Gasu_30970 | M2W815 | M2WZE8 | 3-dehydrosphinganine reductase. | Serine palmitoyltransferase. | 0.954 |
Gasu_21070 | Gasu_01160 | M2Y3V7 | M2Y9J6 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine--glyoxylate transaminase. | 0.917 |
Gasu_21070 | Gasu_21520 | M2Y3V7 | M2Y3D2 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.929 |
Gasu_21070 | Gasu_24950 | M2Y3V7 | M2Y2R8 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine palmitoyltransferase. | 0.829 |
Gasu_21070 | Gasu_25800 | M2Y3V7 | M2W2R7 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.929 |
Gasu_21070 | Gasu_26990 | M2Y3V7 | M2Y1V0 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Threonine dehydratase. | 0.922 |
Gasu_21070 | Gasu_30970 | M2Y3V7 | M2WZE8 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine palmitoyltransferase. | 0.829 |
Gasu_21070 | Gasu_44560 | M2Y3V7 | M2XX08 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Glycine/serine hydroxymethyltransferase. | 0.929 |
Gasu_21070 | Gasu_56660 | M2Y3V7 | M2WSD6 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Tryptophan synthase beta chain. | 0.919 |
Gasu_21520 | Gasu_01160 | M2Y3D2 | M2Y9J6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine--glyoxylate transaminase. | 0.922 |
Gasu_21520 | Gasu_21070 | M2Y3D2 | M2Y3V7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.929 |
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