STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_29620Light-harvesting complex protein. (219 aa)    
Predicted Functional Partners:
Gasu_34630
ATP-dependent Clp protease proteolytic subunit.
      
 0.594
Gasu_14880
ATP-dependent Clp protease proteolytic subunit.
      
 0.594
Gasu_32500
ATP-dependent Clp protease proteolytic subunit.
      
 0.594
Gasu_05450
ATP-dependent Clp protease proteolytic subunit.
      
 0.594
Gasu_46290
DUF1995 domain-containing protein.
  
     0.533
Gasu_14910
Uncharacterized protein.
  
     0.531
Gasu_24020
Uncharacterized protein.
  
     0.507
Gasu_37700
DUF4033 domain-containing protein.
  
     0.455
psbO
Chloroplast photosystem II 33 kDa.
  
     0.446
Gasu_15050
[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase.
  
     0.439
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.