Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_09120 | Gasu_26670 | M2Y744 | M2X0L5 | DNA/RNA-binding protein translin/TB-RBP-like protein. | Translin family protein isoform 2. | 0.999 |
Gasu_18400 | Gasu_26670 | M2Y4F3 | M2X0L5 | Uncharacterized protein. | Translin family protein isoform 2. | 0.467 |
Gasu_26670 | Gasu_09120 | M2X0L5 | M2Y744 | Translin family protein isoform 2. | DNA/RNA-binding protein translin/TB-RBP-like protein. | 0.999 |
Gasu_26670 | Gasu_18400 | M2X0L5 | M2Y4F3 | Translin family protein isoform 2. | Uncharacterized protein. | 0.467 |
Gasu_26670 | accA | M2X0L5 | M2VYT7 | Translin family protein isoform 2. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.487 |
accA | Gasu_26670 | M2VYT7 | M2X0L5 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | Translin family protein isoform 2. | 0.487 |