Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_05350 | Gasu_25010 | M2Y8R1 | M2X177 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Aminomethyltransferase. | 0.503 |
Gasu_05350 | Gasu_34510 | M2Y8R1 | M2WYC3 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.510 |
Gasu_15110 | Gasu_25010 | M2XM48 | M2X177 | Dihydrolipoyl dehydrogenase. | Aminomethyltransferase. | 0.500 |
Gasu_15110 | Gasu_57790 | M2XM48 | M2WS38 | Dihydrolipoyl dehydrogenase. | Glycine dehydrogenase subunit 2. | 0.626 |
Gasu_15110 | Gasu_61820 | M2XM48 | M2XR77 | Dihydrolipoyl dehydrogenase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.925 |
Gasu_17540 | Gasu_25010 | M2XLE5 | M2X177 | Uncharacterized protein. | Aminomethyltransferase. | 0.568 |
Gasu_17540 | Gasu_34510 | M2XLE5 | M2WYC3 | Uncharacterized protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.791 |
Gasu_17540 | Gasu_63080 | M2XLE5 | M2XRH0 | Uncharacterized protein. | Iron-sulfur cluster assembly accessory protein. | 0.682 |
Gasu_17540 | ycf83 | M2XLE5 | M2VSC4 | Uncharacterized protein. | [pt] iron-sulfur cluster assembly protein IscA (Plastid). | 0.682 |
Gasu_25010 | Gasu_05350 | M2X177 | M2Y8R1 | Aminomethyltransferase. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.503 |
Gasu_25010 | Gasu_15110 | M2X177 | M2XM48 | Aminomethyltransferase. | Dihydrolipoyl dehydrogenase. | 0.500 |
Gasu_25010 | Gasu_17540 | M2X177 | M2XLE5 | Aminomethyltransferase. | Uncharacterized protein. | 0.568 |
Gasu_25010 | Gasu_26240 | M2X177 | M2XIV8 | Aminomethyltransferase. | Iron-sulfur protein ISA2-like protein. | 0.568 |
Gasu_25010 | Gasu_34510 | M2X177 | M2WYC3 | Aminomethyltransferase. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.565 |
Gasu_25010 | Gasu_57790 | M2X177 | M2WS38 | Aminomethyltransferase. | Glycine dehydrogenase subunit 2. | 0.545 |
Gasu_25010 | Gasu_61150 | M2X177 | M2VSV3 | Aminomethyltransferase. | GTP cyclohydrolase I. | 0.540 |
Gasu_25010 | Gasu_61820 | M2X177 | M2XR77 | Aminomethyltransferase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.545 |
Gasu_25010 | Gasu_63080 | M2X177 | M2XRH0 | Aminomethyltransferase. | Iron-sulfur cluster assembly accessory protein. | 0.549 |
Gasu_25010 | ycf83 | M2X177 | M2VSC4 | Aminomethyltransferase. | [pt] iron-sulfur cluster assembly protein IscA (Plastid). | 0.549 |
Gasu_26240 | Gasu_25010 | M2XIV8 | M2X177 | Iron-sulfur protein ISA2-like protein. | Aminomethyltransferase. | 0.568 |
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