STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_14220Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (677 aa)    
Predicted Functional Partners:
Gasu_12900
Magnesium chelatase subunit H.
 
 
 0.982
Gasu_09770
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.950
Gasu_58560
Ferrochelatase; Belongs to the ferrochelatase family.
     
 0.945
Gasu_37430
Magnesium-protoporphyrin O-methyltransferase.
   
 
 0.939
Gasu_63150
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
 
  
0.683
Gasu_39730
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
      
 0.540
Gasu_27160
Chlorophyll synthase.
  
  
 0.505
Gasu_22340
Protoporphyrinogen oxidase.
     
  0.499
Gasu_52210
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
  
 0.491
Gasu_43810
Hydroxymethylbilane synthase.
   
  
 0.490
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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