STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_10650Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (415 aa)    
Predicted Functional Partners:
Gasu_36600
Uncharacterized protein.
   
 0.948
Gasu_54860
WD_REPEATS_REGION domain-containing protein.
   
 0.890
Gasu_15800
Chromatin binding protein isoform 2.
   
 0.859
Gasu_63770
Transcription factor WRKY19.
   
 0.859
Gasu_47030
Histone deacetylase.
 
 
0.830
Gasu_48060
H3/H4 histone acetyltransferase.
   
 0.829
Gasu_48070
H3/H4 histone acetyltransferase.
   
 0.829
Gasu_13700
Inhibitor of growth protein.
   
 0.799
Gasu_20350
Retinoblastoma-associated protein.
   
 0.790
Gasu_10110
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.780
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.