STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_03320Cyclase HisF; Belongs to the HisA/HisF family. (334 aa)    
Predicted Functional Partners:
Gasu_11050
Bifunctional phosphoribosyl-ATP diphosphatase / phosphoribosyl-AMPcyclohydrolase isoform 1.
  
 0.995
Gasu_22460
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
  
 0.983
Gasu_40470
[pt] glutamine amidotransferase.
 
     0.951
Gasu_17210
ATP phosphoribosyltransferase.
 
  
 0.946
Gasu_26080
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Belongs to the HisA/HisF family.
  
  
 0.916
Gasu_26000
Anthranilate synthase component II.
  
  
 0.881
Gasu_33750
Indole-3-glycerol phosphate synthase.
  
  
 0.881
Gasu_12880
dCMP deaminase.
 
      0.855
Gasu_20860
Histidinol-phosphate aminotransferase.
 
  
 0.835
Gasu_59440
Histidinol-phosphate aminotransferase.
  
  
 0.762
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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