STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_63770Transcription factor WRKY19. (322 aa)    
Predicted Functional Partners:
Gasu_55400
Nuclear receptor co-repressor 1.
    
 0.957
Gasu_45940
Transcription factor.
    
 0.957
Gasu_13280
mRNA_triPase domain-containing protein.
    
 0.957
Gasu_32130
60S ribosomal protein L9e.
   
  0.940
Gasu_10650
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.859
Gasu_08740
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.859
Gasu_40980
Serine/threonine protein kinase.
   
 0.810
Gasu_47030
Histone deacetylase.
   
 0.800
Gasu_23320
50S ribosomal protein L6 (Plastid); Belongs to the universal ribosomal protein uL6 family.
   
  0.795
Gasu_37740
Small GTP-binding protein of Ras family.
   
 0.759
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.