STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_63450Uroporphyrin-III C-methyltransferase. (289 aa)    
Predicted Functional Partners:
Gasu_43810
Hydroxymethylbilane synthase.
  
 0.987
Gasu_46810
Ferredoxin-nitrite reductase.
 
  
 0.874
Gasu_42650
Adenylyl-sulfate kinase.
  
  
 0.872
Gasu_09200
Adenylylsulfate (APS) reductase, thioredoxin-independent.
  
  
 0.869
Gasu_27710
Sulfite reductase (Ferredoxin).
 
  
 0.855
Gasu_54890
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
  
 0.855
Gasu_08490
Sulfate adenylyltransferase.
  
  
 0.847
Gasu_52630
Sirohydrochlorin cobaltochelatase-like protein.
  
  
 0.798
Gasu_50100
FAD synthetase.
  
  
 0.787
Gasu_39730
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
 
  
 0.770
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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