STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01640RNA methyltransferase, TrmH family. (316 aa)    
Predicted Functional Partners:
Gasu_46370
39S ribosomal protein L47, mitochondrial.
   
 
 0.976
Gasu_11760
Uncharacterized protein.
   
 
 0.975
Gasu_45970
Large subunit ribosomal protein L13 isoform 2.
  
 
 0.961
Gasu_39540
50S ribosomal protein L11 (Mitochondrial); Belongs to the universal ribosomal protein uL11 family.
   
   0.953
Gasu_19000
Mitochondrial ribosomal protein L21.
   
   0.953
Gasu_21480
50S ribosomal protein L24 (Mitochondrial).
  
   0.952
Gasu_21020
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein.
    
   0.949
Gasu_28140
Mitochondrial GTPase 1.
  
 
 0.856
Gasu_04210
tRNA pseudouridine synthase D.
   
   0.838
Gasu_07530
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.775
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.