STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_02110Leucine-rich repeat receptor-like protein kinase. (275 aa)    
Predicted Functional Partners:
Gasu_11570
Transmembrane receptor protein tyrosine kinase.
  
 0.792
Gasu_21510
U2 small nuclear ribonucleoprotein B.
    
 0.672
Gasu_13040
Protein tyrosine phosphatase.
    
 0.668
Gasu_32670
Small nuclear ribonucleoprotein Sm D3.
    
 0.635
Gasu_00100
Small nuclear ribonucleoprotein Sm D2.
    
 0.631
Gasu_25970
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.628
Gasu_12670
Small nuclear ribonucleoprotein B and B.
    
 0.611
Gasu_28640
Small nuclear ribonucleoprotein F isoform 1.
    
  0.596
Gasu_41880
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.593
Gasu_07880
Small nuclear ribonucleoprotein G.
   
  0.591
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.