STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_60560Threonyl-tRNA synthetase. (674 aa)    
Predicted Functional Partners:
Gasu_06310
Threonyl-tRNA synthetase.
  
  
 
0.907
Gasu_07730
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.724
Gasu_49660
Oxygen-independent coproporphyrinogen III oxidase.
   
 
 0.712
Gasu_07290
Histidyl-tRNA synthetase.
  
 
 0.684
Gasu_35360
Ribosomal protein L20 family protein.
  
 
 0.665
Gasu_19000
Mitochondrial ribosomal protein L21.
  
 
 0.655
Gasu_59950
Ribonuclease III.
  
 
 0.650
Gasu_48650
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.646
Gasu_27370
50S ribosomal protein L33 (Mitochondrial).
  
 
 0.644
Gasu_00820
30S ribosomal protein S16 (Mitochondria)l.
  
 
 0.640
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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