STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_60120Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
Gasu_48540
O-linked GlcNAc transferase-like protein isoform 3.
   
 
 0.997
Gasu_55190
Uncharacterized protein.
   
 
 0.997
Gasu_32610
Uncharacterized protein.
    
 
 0.996
Gasu_03460
Uncharacterized protein.
   
 
 0.654
Gasu_57000
Nuclear cap-binding protein subunit 2.
      
 0.560
Gasu_22490
Uncharacterized protein.
    
 
 0.492
Gasu_55610
Translocation protein, Sec family; Belongs to the SecY/SEC61-alpha family.
    
 
 0.478
Gasu_53510
40S ribosomal protein S27.
      
 0.444
Gasu_56420
Vacuolar protein sorting 26, vps26-like protein.
      
 0.438
Gasu_58360
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.412
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.