STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_60260Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (761 aa)    
Predicted Functional Partners:
Gasu_30550
Squalene monooxygenase.
 
 
 0.991
Gasu_24370
Putative ergosterol biosynthetic protein 28 isoform 2.
  
 
 0.984
Gasu_09900
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 
 0.984
Gasu_60150
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.935
Gasu_26310
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.935
Gasu_06490
Cytochrome P45, family 51 (Sterol 14-demethylase); Belongs to the cytochrome P450 family.
 
 
 0.923
Gasu_19640
Cytochrome P45, family 39, subfamily A (24-hydroxycholesterol7alpha-hydroxylase); Belongs to the cytochrome P450 family.
 
 
 0.902
Gasu_22080
Sterol-4alpha-carboxylate 3-dehydrogenase (Decarboxylating); Belongs to the 3-beta-HSD family.
 
 
 0.826
Gasu_11870
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 
 0.819
Gasu_00950
Farnesyl-diphosphate farnesyltransferase.
 
  
 0.794
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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