STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_57020Rhomboid family protein. (371 aa)    
Predicted Functional Partners:
Gasu_42040
Sec-independent protein translocase protein TatA.
   
 
 0.708
Gasu_31510
Band 7 family protein isoform 1.
   
 0.541
Gasu_05990
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.525
Gasu_20830
Rhomboid-like protein isoform 2.
      
 0.491
Gasu_02320
Prohibitin.
   
 0.488
Gasu_62260
Peptidase.
   
 
 0.480
Gasu_17050
Vacuolar protein sorting protein DigA.
      
 0.474
Gasu_06450
Prohibitin.
   
 0.454
Gasu_46170
Carboxyl-terminal processing protease.
   
 0.454
Gasu_48520
PHB domain-containing protein.
   
 0.454
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.