STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_57200Peptidase family protein. (448 aa)    
Predicted Functional Partners:
Gasu_19460
Aminopeptidase isoform 2.
  
 0.826
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.820
Gasu_18460
Uncharacterized protein.
   
  0.819
Gasu_03600
U3 snoRNP component Sof1p.
   
  0.818
Gasu_04120
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.818
Gasu_13430
PINc domain-containing protein.
    
  0.818
Gasu_02050
CBF domain-containing protein.
    
  0.818
Gasu_22210
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.810
Gasu_34220
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.810
Gasu_56620
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.793
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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