STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_54430DNA mismatch repair protein MutS. (849 aa)    
Predicted Functional Partners:
Gasu_57130
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.998
Gasu_44750
DNA mismatch repair protein MutL isoform 2.
 
 0.885
Gasu_05100
DNA mismatch repair protein MLH1.
 
 0.879
Gasu_22900
DNA mismatch repair protein PMS2.
 
 0.868
Gasu_14730
DNA mismatch repair protein MLH3.
  
 0.829
Gasu_08480
ATP-dependent RNA helicase-like protein.
   
 
 0.783
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.763
Gasu_30440
Formamidase.
  
 0.761
Gasu_54170
Exonuclease 1.
   
 0.736
Gasu_19150
Crossover junction endonuclease MUS81 isoform 2.
    
 
 0.624
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.