STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_53570TP53 regulating kinase. (175 aa)    
Predicted Functional Partners:
Gasu_32750
O-sialoglycoprotein endopeptidase.
 
 0.999
Gasu_65540
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
   
 0.998
Gasu_58940
O-sialoglycoprotein endopeptidase.
  
 0.929
Gasu_08340
Probable ribosome biogenesis protein Gasu_08340; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
      0.800
Gasu_35510
F-box and WD-4 domain protein 1/11.
 
      0.691
Gasu_65100
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
   
  
 0.566
Gasu_07350
RIO kinase 1.
     
 0.522
Gasu_12180
Transducin family protein / WD-40 repeat family protein isoform 1.
   
 
 0.520
Gasu_54190
Uncharacterized protein.
    
   0.476
Gasu_57460
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.457
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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