STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_53270Ribosomal_L7Ae domain-containing protein. (190 aa)    
Predicted Functional Partners:
Gasu_22370
Box C/D snoRNP component Nop56.
   
 0.989
Gasu_00510
U3 snoRNP component Utp15p-like protein.
   
 0.984
Gasu_39490
Box C/D snoRNP component Nop58.
   
 0.977
Gasu_38910
Fibrillarin-like pre-rRNA processing protein.
   
 0.965
Gasu_34220
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.959
Gasu_36440
Nucleic acid binding protein.
   
 0.947
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.943
Gasu_20930
40S ribosomal protein S19e.
  
 0.940
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
  
 0.939
Gasu_18730
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.938
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.