STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_49460SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily D. (551 aa)    
Predicted Functional Partners:
Gasu_13360
SWI/SNF related-matrix-associated actin-dependent regulator ofchromatin subfamily C.
    
 0.998
Gasu_08570
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily B member 1.
   
 0.997
Gasu_23870
ARID/BRIGHT DNA binding domain containing protein.
    
 0.893
Gasu_36550
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.887
Gasu_26170
DNA binding / transcription factor.
   
 
 0.878
Gasu_29570
Actin-like protein 6A; Belongs to the actin family.
   
 0.877
Gasu_06630
Actin; Belongs to the actin family.
   
 0.877
Gasu_56060
Chromatin remodeling complex SWI/SNF component, Snf2.
   
 0.849
Gasu_44450
Laminin-like protein.
   
 0.849
Gasu_50140
Chromatin remodeling complex / DNA-dep ATPase.
   
 0.849
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.