STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_46920Actin; Belongs to the actin family. (374 aa)    
Predicted Functional Partners:
Gasu_42100
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
 0.757
Gasu_47560
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.743
Gasu_55060
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.718
Gasu_29570
Actin-like protein 6A; Belongs to the actin family.
 
 
0.717
Gasu_61570
Histone H3.
 
 0.701
Gasu_06630
Actin; Belongs to the actin family.
  
 
0.694
Gasu_08570
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily B member 1.
   
 0.693
Gasu_30210
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 
 0.690
Gasu_58460
Elongator complex protein 4.
    
 
 0.689
Gasu_58410
RuvB-like helicase; Belongs to the RuvB family.
    
 0.686
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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