STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_42720Membrane-associated zinc metalloprotease. (465 aa)    
Predicted Functional Partners:
Gasu_43560
Sorting and assembly machinery component 50.
  
  
 0.785
Gasu_39440
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.547
Gasu_47250
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.547
Gasu_37410
Carboxyl-terminal processing protease isoform 1.
  
  
 0.475
Gasu_56370
Trigger factor type chaperone family protein.
     
 0.451
Gasu_53630
Peptidyl-prolyl cis-trans isomerase isoform 2.
  
  
 0.431
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.