STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_39970[pt] beta-carotene hydroxylase. (260 aa)    
Predicted Functional Partners:
Gasu_05920
Stearoyl-CoA desaturase (Delta-9 desaturase).
  
 
 0.614
Gasu_05710
Rubredoxin family protein.
  
  
 0.536
Gasu_33560
Uncharacterized protein.
  
     0.512
Gasu_40550
[pt] allophycocyanin beta subunit (ApcB).
  
     0.466
Gasu_40090
[pt] phycobilisome core component (ApcF).
  
     0.464
cpcB
[pt] C-phycocyanin beta chain.
  
     0.454
apcD
Allophycocyanin gamma subunit.
  
     0.447
Gasu_01490
CpcT/CpeT protein family member.
  
     0.431
Gasu_56120
PBS lyase HEAT domain protein repeat-containing protein.
  
     0.427
cpcA
[pt] C-phycocyanin alpha chain.
  
     0.415
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.