STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_31910Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
Gasu_09960
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 
 0.728
Gasu_46200
GTP-binding protein.
  
 
 0.728
Gasu_04710
tRNA modification GTPase isoform 1.
  
 
 0.728
Gasu_55970
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 
 0.593
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.574
Gasu_59710
COPII-coated vesicle protein SurF4/Erv29, putative.
   
 
 0.532
Gasu_16470
GTP-binding protein HflX.
  
  
 0.521
Gasu_03410
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.517
Gasu_52210
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
 0.489
Gasu_04660
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) isoform 2.
     
 0.483
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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