STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_31360Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)    
Predicted Functional Partners:
Gasu_27450
Peptidyl-prolyl cis-trans isomerase-like protein.
 
   
  0.982
Gasu_53080
E3 SUMO-protein ligase RanBP2.
 
 
 0.942
Gasu_01710
Pre-mRNA-processing factor SLU7.
    
 0.922
Gasu_04400
Peptidyl-prolyl cis-trans isomerase-like-protein isoform 2.
  
 
0.914
Gasu_27660
Transducin family protein / WD-40 repeat family protein.
    
 0.891
Gasu_00450
Uncharacterized protein.
   
  0.878
Gasu_04240
ATP-dependent RNA helicase.
  
  0.875
Gasu_35690
Pre-mRNA-splicing factor SYF2.
 
  
 0.864
Gasu_24340
MI domain-containing protein.
   
 0.863
Gasu_50780
Peptidyl-prolyl cis-trans isomerase B (Cyclophilin B).
  
0.863
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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