STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_30210Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (327 aa)    
Predicted Functional Partners:
Gasu_11870
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.977
Gasu_49040
Isopentenyl-diphosphate delta-isomerase.
 
 
 0.965
Gasu_19270
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.950
Gasu_14150
Farnesyltransferase / geranylgeranyltransferase isoform 1.
     
 0.946
Gasu_47250
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.940
Gasu_10400
Geranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.933
Gasu_12630
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.933
Gasu_00950
Farnesyl-diphosphate farnesyltransferase.
  
 0.922
Gasu_32640
Phytoene synthase.
  
 0.922
Gasu_18090
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
   
 0.920
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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