STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_22360Choline dehydrogenase. (301 aa)    
Predicted Functional Partners:
Gasu_22350
Choline dehydrogenase.
 
     0.951
Gasu_57030
Glycerophosphoryl diester phosphodiesterase family protein isoform 1.
    
 0.750
Gasu_16220
Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs.
 
    
 0.701
Gasu_47390
Anaphase-promoting complex subunit 1.
    
 0.685
Gasu_34320
Purine transporter isoform 2.
    
 0.533
Gasu_49140
Ankyrin-repeat protein.
    
 0.533
Gasu_17780
NAD+ diphosphatase.
    
 0.533
Gasu_12680
ANK_REP_REGION domain-containing protein.
    
 0.533
Gasu_06430
Oxysterol-binding protein-like protein.
    
 0.533
Gasu_46820
Oxidoreductase molybdopterin binding / sulfite oxidase.
   
  
 0.493
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.