STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_22750Eukaryotic translation initiation factor SUI1 family protein. (595 aa)    
Predicted Functional Partners:
Gasu_24720
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.642
Gasu_36510
40S ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.630
Gasu_55280
WD_REPEATS_REGION domain-containing protein.
    
   0.625
Gasu_35280
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
 
 0.608
Gasu_59240
Eukaryotic translation initiation factor SUI1 family protein.
    
 
 0.596
Gasu_58960
40S ribosomal protein S2e.
    
   0.568
Gasu_49340
40S ribosomal protein S15e; Belongs to the universal ribosomal protein uS19 family.
    
   0.568
Gasu_06000
40S ribosomal protein S17.
    
   0.564
Gasu_20930
40S ribosomal protein S19e.
   
   0.564
Gasu_34220
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.559
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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