STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_17860Structural maintenance of chromosome (SMC ATPase family) isoform 1. (1164 aa)    
Predicted Functional Partners:
Gasu_52440
Condensin complex subunit 3.
   
 0.999
Gasu_48980
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.999
Gasu_22180
Condensin complex subunit 2.
   
 0.999
Gasu_15610
Structural maintenance of chromosomes protein.
  
0.999
Gasu_25080
Kinesin family member isoform 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.954
Gasu_59730
Kinetochore protein NDC8.
   
 
 0.926
Gasu_30190
DNA polymerase eta subunit.
  
 0.899
Gasu_08700
Cohesin complex subunit SA-1/2.
   
 0.842
Gasu_57770
Structural maintenance of chromosomes protein.
  
 
0.819
Gasu_18650
DNA polymerase.
   
 
 0.817
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.