STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_11930ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (624 aa)    
Predicted Functional Partners:
Gasu_54870
Elongation factor EF-2.
   
 0.975
Gasu_56590
Pre-mRNA-processing factor 6.
   
 0.970
Gasu_56460
Pre-mRNA-splicing factor CDC5/CEF1.
    
 0.960
Gasu_50360
Translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
    
 0.829
Gasu_47570
F-type H+-transporting ATPase subunit delta.
   
   0.777
Gasu_52880
F-type H+-transporting ATPase subunit delta.
  
 
 0.772
Gasu_40560
[pt] F-type H+-transporting ATPase subunit beta.
   
 
 0.711
Gasu_47560
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.711
Gasu_57930
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
  
0.709
Gasu_13250
F-type H+-transporting ATPase subunit gamma.
   
 
 0.701
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.