STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_12240Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
Gasu_36050
mRNA-decapping enzyme subunit 2.
     
 0.638
Gasu_57280
NTP_transf_9 domain-containing protein.
     
 0.638
Gasu_43000
Uncharacterized protein.
   
 0.559
Gasu_22330
Exosome complex component RRP45.
   
 
 0.523
Gasu_39660
Exosome complex component RRP4.
     
 0.522
Gasu_08270
Exosome complex component RRP42.
     
 0.515
Gasu_45800
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.505
Gasu_35970
Exosome complex component RRP4.
   
 
 0.493
Gasu_18320
Exosome complex component RRP43.
     
 0.492
Gasu_42580
Exosome complex component CSL4.
   
 
  0.480
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.