STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_12390Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (256 aa)    
Predicted Functional Partners:
Gasu_08340
Probable ribosome biogenesis protein Gasu_08340; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
 
  
 0.907
Gasu_56410
tRNA/rRNA cytosine-C5-methylase NOL1-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.554
Gasu_53530
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.485
Gasu_31280
E3 ubiquitin-protein ligase TRIP12.
    
   0.435
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.