STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_11500E3 ubiquitin-protein ligase RAD18. (386 aa)    
Predicted Functional Partners:
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.997
Gasu_08480
ATP-dependent RNA helicase-like protein.
   
 
 0.947
Gasu_41850
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.935
Gasu_11520
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.935
Gasu_30190
DNA polymerase eta subunit.
   
 
 0.850
Gasu_22910
DNA polymerase.
   
 0.825
Gasu_12420
SNF2 domain-containing protein.
    
 0.823
Gasu_06540
SNF2 domain-containing protein.
   
 0.814
Gasu_05230
SNF2 domain-containing protein.
   
 0.814
Gasu_48760
DNA helicase II / ATP-dependent DNA helicase PcrA.
    
 
 0.799
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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