Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_09920 | Gasu_10140 | M2XP32 | M2X634 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Ubiquitin. | 0.752 |
Gasu_09920 | Gasu_13790 | M2XP32 | M2X4Q0 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Ubiquitin. | 0.613 |
Gasu_09920 | Gasu_17740 | M2XP32 | M2Y4W3 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | PI3K/PI4K domain-containing protein. | 0.614 |
Gasu_09920 | Gasu_31280 | M2XP32 | M2XHD0 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | E3 ubiquitin-protein ligase TRIP12. | 0.794 |
Gasu_09920 | Gasu_46720 | M2XP32 | M2XW74 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Phytoene dehydrogenase, phytoene desaturase. | 0.524 |
Gasu_09920 | Gasu_49630 | M2XP32 | M2WUB7 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | 40S ribosomal protein S27Ae. | 0.657 |
Gasu_09920 | Gasu_51560 | M2XP32 | M2XBN7 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | GMP synthase (Glutamine-hydrolysing). | 0.553 |
Gasu_09920 | Gasu_52970 | M2XP32 | M2VV38 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Ubiquitin. | 0.613 |
Gasu_09920 | Gasu_61140 | M2XP32 | M2WR02 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Ubiquitin carboxyl-terminal hydrolase 5/13. | 0.577 |
Gasu_09920 | Gasu_66020 | M2XP32 | M2XQ37 | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | Ubiquitin-like domain-containing protein. | 0.657 |
Gasu_10140 | Gasu_09920 | M2X634 | M2XP32 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | 0.752 |
Gasu_10140 | Gasu_13790 | M2X634 | M2X4Q0 | Ubiquitin. | Ubiquitin. | 0.878 |
Gasu_10140 | Gasu_17740 | M2X634 | M2Y4W3 | Ubiquitin. | PI3K/PI4K domain-containing protein. | 0.878 |
Gasu_10140 | Gasu_31280 | M2X634 | M2XHD0 | Ubiquitin. | E3 ubiquitin-protein ligase TRIP12. | 0.956 |
Gasu_10140 | Gasu_49630 | M2X634 | M2WUB7 | Ubiquitin. | 40S ribosomal protein S27Ae. | 0.998 |
Gasu_10140 | Gasu_52970 | M2X634 | M2VV38 | Ubiquitin. | Ubiquitin. | 0.878 |
Gasu_10140 | Gasu_61140 | M2X634 | M2WR02 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase 5/13. | 0.967 |
Gasu_10140 | Gasu_66020 | M2X634 | M2XQ37 | Ubiquitin. | Ubiquitin-like domain-containing protein. | 0.984 |
Gasu_13790 | Gasu_09920 | M2X4Q0 | M2XP32 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase 25/28; Belongs to the peptidase C19 family. | 0.613 |
Gasu_13790 | Gasu_10140 | M2X4Q0 | M2X634 | Ubiquitin. | Ubiquitin. | 0.878 |
page 1 of 4