STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_04710tRNA modification GTPase isoform 1. (552 aa)    
Predicted Functional Partners:
Gasu_22140
Glucose inhibited division protein A.
 
 0.879
Gasu_31910
Uncharacterized protein.
  
 
 0.728
Gasu_19000
Mitochondrial ribosomal protein L21.
   
 
 0.647
Gasu_45970
Large subunit ribosomal protein L13 isoform 2.
    
 
 0.633
Gasu_39540
50S ribosomal protein L11 (Mitochondrial); Belongs to the universal ribosomal protein uL11 family.
    
   0.632
Gasu_28140
Mitochondrial GTPase 1.
  
 
 0.632
Gasu_01640
RNA methyltransferase, TrmH family.
   
 
 0.629
Gasu_04210
tRNA pseudouridine synthase D.
   
   0.591
Gasu_11760
Uncharacterized protein.
   
   0.587
Gasu_46370
39S ribosomal protein L47, mitochondrial.
    
   0.583
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.